2020  |  2019  |  2018  |  before 2018


2020

High-precision protein-tracking with interferometric scattering microscopy

Richard W. Taylor, Cornelia Holler, Reza Gholami Mahmoodabadi, Michelle Küppers, Houman Mirzaalian Dastjerdi, Vasily Zaburdaev, Alexandra Schambony, Vahid Sandoghdar

Frontiers in Cell and Developmental Biology 8 590158 (2020) | Journal

Liquid Phase Separation Controlled by pH

Omar Adame-Arana, Christoph A. Weber, Vasily Zaburdaev, Jacques Prost, Frank Julicher

Biophysical Journal 119(8) 1590-1605 (2020) | Journal

Exogenous ethanol induces a metabolic switch that prolongs the survival of Caenorhabditis elegansdauer larva and enhances its resistance to desiccation

Damla Kaptan, Sider Penkov, Xingyu Zhang, Vamshidhar R. Gade, Bharath Kumar Raghuraman, Roberta Galli, Julio L. Sampaio, Robert Haase, Edmund Koch, et al.

Aging Cell 19(10) e13214 (2020) | Journal

Ultrahigh-speed imaging of rotational diffusion on a lipid bilayer

Mahdi Mazaheri, Jens Ehrig, Alexey Shkarin, Vasily Zaburdaev, Vahid Sandoghdar

Nano Letters 20 7213-7219 (2020) | Journal


2019

Rectification of Bacterial Diffusion in Microfluidic Labyrinths

Ariane Weber, Marco Bahrs, Zahra Alirezai, Xingyu Zhang, Carsten Beta, Vasily Zaburdaev

Frontiers in Physics 7 148 (2019) | Journal

Histone H3K27 acetylation precedes active transcription during zebrafish zygotic genome activation as revealed by live-cell analysis

Yuko Sato, Lennart Hilbert, Haruka Oda, Yinan Wan, John M. Heddleston, Teng-Leong Chew, Vasily Zaburdaev, Philipp Keller, Timothee Lionnet, et al.

Development 146 SI(19) UNSP dev179127 (2019) | Journal

How bacterial cells and colonies move on solid substrates

Wolfram Poenisch, Christoph A. Weber, Vasily Zaburdaev

Physical Review E 99(4) 042419 (2019) | Journal

The shape of pinned forced polymer loops

Wenwen Huang, Vasily Zaburdaev

Soft Matter 15(8) 1785-1792 (2019) | Journal

Identifying the mechanism for superdiffusivity in mouse fibroblast motility

Giuseppe Passucci, Megan E. Brasch, James H. Henderson, Vasily Zaburdaev, M. Lisa Manning

PLoS Computational Biology 15(2) e1006732 (2019) | Journal


2018

Pili mediated intercellular forces shape heterogeneous bacterial microcolonies prior to multicellular differentiation

Wolfram Poenisch, Kelly B. Eckenrode, Khaled Alzurqa, Hadi Nasrollahi, Christoph Weber, Vasily Zaburdaev, Nicolas Biais

Scientific Reports 8 16567 (2018) | Journal

Exactly solvable dynamics of forced polymer loops

Wenwen Huang, Yen Ting Lin, Daniela Froemberg, Jaeoh Shin, Frank Juelicher, Vasily Zaburdaev

New Journal of Physics 20 113005 (2018) | Journal | PDF

Intracellular Mass Density Increase Is Accompanying but Not Sufficient for Stiffening and Growth Arrest of Yeast Cells

Shada Abuhattum, Kyoohyun Kim, Titus M. Franzmann, Anne Esslinger, Daniel Midtvedt, Raimund Schluessler, Stephanie Mollmert, Hui-Shun Kuan, Simon Alberti, et al.

Frontiers in Physics 6 131 (2018) | Journal


before 2018

Live cell X-ray imaging of autophagic vacuoles formation and chromatin dynamics in fission yeast

Natalja Strelnikova, Nora Sauter, Manuel Guizar-Sicairos, Michael Gollner, Ana Diaz, Petrina Delivani, Mariola Chacon, Iva M. Tolic, Vasily Zaburdaev, et al.

Scientific Reports 7 13775 (2017) | Journal | PDF

Elasticity-based polymer sorting in active fluids: a Brownian dynamics study

Jaeoh Shin, Andrey G. Cherstvy, Won Kyu Kim, Vasily Zaburdaev

Physical Chemistry Chemical Physics 19(28) 18338-18347 (2017) | Journal

A tunable refractive index matching medium for live imaging cells, tissues and model organisms

Tobias Boothe, Lennart Hilbert, Michael Heide, Lea Berninger, Wieland B. Huttner, Vasily Zaburdaev, Nadine L. Vastenhouw, Eugene W. Myers, David N. Drechsel, et al.

eLife 6 e27240 (2017) | Journal

Competition between histone and transcription factor binding regulates the onset of transcription in zebrafish embryos

Shai R. Joseph, Mate Palfy, Lennart Hilbert, Mukesh Kumar, Jens Karschau, Vasily Zaburdaev, Andrej Shevchenko, Nadine L. Vastenhouw

eLife 6 e23326 (2017) | Journal

Limit theorems for Levy walks in d dimensions: rare and bulk fluctuations

Itzhak Fouxon, Sergey Denisov, Vasily Zaburdaev, Eli Barkai

Journal of Physics A-Mathematical and Theoretical 50(15) 154002 (2017) | Journal

Multiscale modeling of bacterial colonies: how pili mediate the dynamics of single cells and cellular aggregates

Wolfram Poenisch, Christoph A. Weber, Guido Juckeland, Nicolas Biais, Vasily Zaburdaev

New Journal of Physics 19 015003 (2017) | Journal | PDF

Superdiffusive Dispersals Impart the Geometry of Underlying Random Walks

Vasily Zaburdaev, I. Fouxon, S. Denisov, E. Barkai

Physical Review Letters 117(27) 270601 (2016) | Journal

Nucleosomal arrangement affects single-molecule transcription dynamics

Veronika Fitz, Jaeoh Shin, Christoph Ehrlich, Lucas Farnung, Patrick Cramer, Vasily Zaburdaev, Stephan W. Grill

Proceedings of the National Academy of Sciences of the United States of America 113(45) 12733-12738 (2016) | Journal

Reaction front propagation of actin polymerization in a comb-reaction system

A. Iomin, Vasily Zaburdaev, T. Pfohl

Chaos Solitons & Fractals 92 115-122 (2016) | Journal

A pH-driven transition of the cytoplasm from a fluid- to a solid-like state promotes entry into dormancy

Matthias Christoph Munder, Daniel Midtvedt, Titus Franzmann, Elisabeth Nueske, Oliver Otto, Maik Herbig, Elke Ulbricht, Paul Mueller, Anna Taubenberger, et al.

eLife 5 e09347 (2016) | Journal

Pulled Polymer Loops as a Model for the Alignment of Meiotic Chromosomes

Yen Ting Lin, Daniela Froemberg, Wenwen Huang, Petrina Delivani, Mariola Chacon, Iva M. Tolic, Frank Juelicher, Vasily Zaburdaev

Physical Review Letters 115(20) 208102 (2015) | Journal

Pili-Induced Clustering of N-gonorrhoeae Bacteria

Johannes Taktikos, Yen Ting Lin, Holger Stark, Nicolas Biais, Vasily Zaburdaev

PLOS ONE 10(9) e0137661 (2015) | Journal | PDF

Formation and dissolution of bacterial colonies

Christoph A. Weber, Yen Ting Lin, Nicolas Biais, Vasily Zaburdaev

Physical Review E 92(3) 032704 (2015) | Journal

Levy walks

Vasily Zaburdaev, S. Denisov, J. Klafter

Reviews of Modern Physics 87(2) 483-530 (2015) | Journal

Asymptotic densities of ballistic Levy walks

D. Froemberg, M. Schmiedeberg, E. Barkai, Vasily Zaburdaev

Physical Review E 91(2) 022131 (2015) | Journal

Random walk patterns of a soil bacterium in open and confined environments

M. Theves, J. Taktikos, Vasily Zaburdaev, H. Stark, C. Beta

EPL 109(2) 28007 (2015) | Journal

Uncovering the Mechanism of Trapping and Cell Orientation during Neisseria gonorrhoeae Twitching Motility

Vasily Zaburdaev, Nicolas Biais, Michael Schmiedeberg, Jens Eriksson, Ann-Beth Jonsson, Michael P. Sheetz, David A. Weitz

Biophysical Journal 107(7) 1523-1531 (2014) | Journal

How the Motility Pattern of Bacteria Affects Their Dispersal and Chemotaxis (vol 8, e81936, 2013)

J. Taktikos, H. Stark, Vasily Zaburdaev

PLoS ONE 9(3) e92348 (2014) | Journal

How the Motility Pattern of Bacteria Affects Their Dispersal and Chemotaxis

Johannes Taktikos, Holger Stark, Vasily Zaburdaev

PLoS One 8(12) e81936 (2013) | Journal

A Bacterial Swimmer with Two Alternating Speeds of Propagation

Matthias Theves, Johannes Taktikos, Vasily Zaburdaev, Holger Stark, Carsten Beta

Biophysical Journal 105(8) 1915-1924 (2013) | Journal

Space-Time Velocity Correlation Function for Random Walks

Vasily Zaburdaev, S. Denisov, P. Haenggi

Physical Review Letters 110(17) 170604 (2013) | Journal

Liquid transport facilitated by channels in Bacillus subtilis biofilms

James N. Wilking, Vasily Zaburdaev, Michael De Volder, Richard Losick, Michael P. Brenner, David A. Weitz

Proceedings of the National Academy of Sciences of the United States of America 110(3) 848-852 (2013) | Journal

Langevin description of superdiffusive Levy processes

S. Eule, Vasily Zaburdaev, R. Friedrich, T. Geisel

Physical Review E 86(4) 041134 (2012) | Journal

Collective dynamics of model microorganisms with chemotactic signaling

Johannes Taktikos, Vasily Zaburdaev, Holger Stark

Physical Review E 85(5) 051901 (2012) | Journal

Levy walks with velocity fluctuations

S. Denisov, Vasily Zaburdaev, P. Haenggi

Physical Review E 85(3) 031148 (2012) | Journal

Modeling a self-propelled autochemotactic walker

Johannes Taktikos, Vasily Zaburdaev, Holger Stark

Physical Review E 84(4) 041924 (2011) | Journal

Langevin Dynamics Deciphers the Motility Pattern of Swimming Parasites

Vasily Zaburdaev, Sravanti Uppaluri, Thomas Pfohl, Markus Engstler, Rudolf Friedrich, Holger Stark

Physical Review Letters 106(20) 208103 (2011) | Journal

Perturbation Spreading in Many-Particle Systems: A Random Walk Approach

Vasily Zaburdaev, S. Denisov, P. Haenggi

Physical Review Letters 106(18) 180601 (2011) | Journal

On moments and scaling regimes in anomalous random walks

Michael Schmiedeberg, Vasily Zaburdaev, Holger Stark

Journal of Statistical Mechanics-Theory and Experiment P12020 (2009) | Journal

Microscopic approach to random walks

Vasily Zaburdaev

Journal of Statistical Physics 133(1) 159-167 (2008) | Journal

Random walks with random velocities

Vasily Zaburdaev, Michael Schmiedeberg, Holger Stark

Physical Review E 78(1) 011119 (2008) | Journal

Stochastic transport through complex comb structures

Vasily Zaburdaev, P. V. Popov, A. S. Romanov, K. V. Chukbar

Journal of Experimental and Theoretical Physics - JETP 106(5) 999-1005 (2008) | Journal

Chaoticity of the wet granular gas

A. Fingerle, S. Herminghaus, Vasily Zaburdaev

Physical Review E 75(6) 061301 (2007) | Journal

Dry and wet granular shock waves

Vasily Zaburdaev, S. Herminghaus

Physical Review E 75(3) 031304 (2007) | Journal

Free cooling of the one-dimensional wet granular gas

Vasily Zaburdaev, M. Brinkmann, S. Herminghaus

Physical Review Letters 97(1) 018001 (2006) | Journal

Random walk model with waiting times depending on the preceding jump length

Vasily Zaburdaev

Journal of Statistical Physics 123(4) 871-881 (2006) | Journal

Theory of heat transport in a magnetized high-temperature plasma

Vasily Zaburdaev

Plasma Physics Reports 31(12) 1071-1077 (2005) | Journal

Kolmogorov-Sinai entropy of the dilute wet granular gas

A Fingerle, S Herminghaus, Vasily Zaburdaev

Physical Review Letters 95(19) 198001 (2005) | Journal

'Hermite' states in the quantum interaction of vortices

Vasily Zaburdaev, AS Romanov, KV Chukbar

Physics-Uspekhi 48(8) 841-846 (2005) | Journal

Subdiffusion in random compressible flows

K Chukbar, Vasily Zaburdaev

Physical Review E 71(6) 061105 (2005) | Journal

Nonlinear dynamics of electron vortex lattices

Vasily Zaburdaev, VV Smirnov, KV Chukbar

Plasma Physics Reports 30(3) 214-217 (2004) | Journal

Comment on "Towards deterministic equations for Levy walks: The fractional material derivative"

KV Chukbar, Vasily Zaburdaev

Physical Review E 68(3) 033101 (2003) | Journal

Memory effects in stochastic transport

Vasily Zaburdaev, KV Chukbar

JETP Letters 77(10) 551-555 (2003) | Journal

Enhanced superdiffusion and finite velocity of Levy flights

Vasily Zaburdaev, KV Chukbar

Journal of Experimental and Theoretical Physics 94(2) 252-259 (2002) | Journal

Skin effects in a dusty plasma

Vasily Zaburdaev

Plasma Physics Reports 27(5) 407-411 (2001) | Journal

Theory of nondiffusive penetration of a magnetic field into a conducting medium

Vasily Zaburdaev

Plasma Physics Reports 26(5) 462-464 (2000) | Journal

Contact

Vasily Zaburdaev

Cauerstr. 11
Room 02.387
91058 Erlangen

Phone: +49 9131 85-67123
Email: vasily.zaburdaev@fau.de


Silke Besold

Secretary
Friedrich-Alexander Universität Erlangen-Nürnberg
Chair of Mathematics in Life Sciences

Cauerstr. 11
Room 02.386
91058 Erlangen

Phone: +49 9131 85-67121
Email: silke.besold@fau.de

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